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1.
Plant Dis ; 107(3): 929-934, 2023 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-36265142

RESUMO

Dollar spot (DS) is a destructive fungal disease impacting almost all warm- and cool-season turfgrasses worldwide. Multiple fungal species in the genus Clarireedia are causal agents of DS. Here, we present whole-genome assemblies of nine fungal isolates in the genus Clarireedia, including four species (C. paspali, C. hainanense, C. jacksonii, and C. monteithiana) causing DS on seashore paspalum (Paspalum vaginatum Sw.), creeping bentgrass (Agrostis stolonifera L.), and Kentucky bluegrass (Poa pratensis L.) in China. This work provides valuable baseline genomic data to support further research and management of DS pathogens on turfgrasses.


Assuntos
Agrostis , Ascomicetos , Poa , Ascomicetos/genética , Agrostis/genética , Agrostis/microbiologia , Genômica , China
2.
Plant Dis ; 106(2): 641-647, 2022 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-34633241

RESUMO

Pythium root rot (PRR) is a disease that can rapidly devastate large swaths of golf course putting greens, with little recourse once symptoms appear. Golf courses routinely apply preventive fungicides for root diseases, which may alter the rhizosphere microbiome, leading to unintended effects on plant health. A multiyear field trial was initiated on a 'T-1' creeping bentgrass (Agrostis stolonifera L. cultivar T-1) putting green in College Park, Maryland to evaluate preventive PRR management for disease suppression and effects on rhizosphere bacterial communities. Fungicides commonly used to prevent PRR and a biological fungicide were repeatedly applied to experimental plots throughout the growing season. Rhizosphere samples were collected twice annually from each plot for evaluation of rhizosphere bacterial communities through amplicon sequencing and monitoring of biological control organism populations via quantitative PCR. Cyazofamid was the only treatment to suppress PRR in both years compared with the control. Fosetyl-Al on a 14-day interval and Bacillus subtilis QST713 also reduced PRR severity in 2019 compared with the nontreated control. Treatments did not significantly affect bacterial diversity or relative abundances of bacterial classes; however, seasonal environmental changes did. Repeated rhizosphere-targeted applications of B. subtilis QST713 appear to have established the bacterium into the rhizosphere, as populations increased between samples, even after applications stopped. These findings suggest that QST713 may reduce pathogen pressure when repeatedly applied and can reduce fungicide usage during periods of low PRR pressure.


Assuntos
Agrostis , Fungicidas Industriais , Pythium , Agrostis/microbiologia , Bactérias , Fungicidas Industriais/farmacologia , Rizosfera
3.
Appl Environ Microbiol ; 87(10)2021 04 27.
Artigo em Inglês | MEDLINE | ID: mdl-33741622

RESUMO

Dollar spot, caused by the fungal pathogen Clarireedia spp., is an economically important foliar disease of amenity turfgrass in temperate climates worldwide. This disease often occurs in a highly variable manner, even on a local scale with relatively uniform environmental conditions. The objective of this study was to investigate mechanisms behind this local variation, focusing on contributions of the soil and rhizosphere microbiome. Turfgrass, rhizosphere, and bulk soil samples were collected from within a 256-m2 area of healthy turfgrass, transported to a controlled environment chamber, and inoculated with Clarireedia jacksonii Bacterial communities were profiled by targeting the 16S rRNA gene, and 16 different soil chemical properties were assessed. Despite their initial uniform appearance, the samples differentiated into highly susceptible and moderately susceptible groups following inoculation in the controlled environment chamber. The highly susceptible samples harbored a unique rhizosphere microbiome with suggestively lower relative abundance of putative antibiotic-producing bacterial taxa and higher predicted abundance of genes associated with xenobiotic biodegradation pathways. In addition, stepwise regression revealed that bulk soil iron content was the only significant soil characteristic that positively regressed with decreased dollar spot susceptibility during the peak disease development stage. These findings suggest that localized variation in soil iron induces the plant to select for a particular rhizosphere microbiome that alters the disease outcome. More broadly, further research in this area may indicate how plot-scale variability in soil properties can drive variable plant disease development through alterations in the rhizosphere microbiome.IMPORTANCE Dollar spot is the most economically important disease of amenity turfgrass, and more fungicides are applied targeting dollar spot than any other turfgrass disease. Dollar spot symptoms are small (3 to 5 cm), circular patches that develop in a highly variable manner within plot scale even under seemingly uniform conditions. The mechanism behind this variable development is unknown. This study observed that differences in dollar spot development over a 256-m2 area were associated with differences in bulk soil iron concentration and correlated with a particular rhizosphere microbiome. These findings provide interesting avenues for future research to further characterize the mechanisms behind the highly variable development of dollar spot, which may inform innovative control strategies. Additionally, these results suggest that small changes in soil properties can alter plant activity and hence the plant-associated microbial community, which has important implications for a broad array of agricultural and horticultural plant pathosystems.


Assuntos
Agrostis/microbiologia , Ascomicetos , Ferro/análise , Doenças das Plantas/microbiologia , Rizosfera , Microbiologia do Solo , Solo/química , Bactérias/genética , Bactérias/isolamento & purificação , Microbiota , RNA Ribossômico 16S/genética
4.
Mycologia ; 111(2): 265-273, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-30856060

RESUMO

A novel species of Microdochium was identified as the causal agent of a leaf blight of Poa pratensis (Kentucky blue grass) and Agrostis stolonifera (Creeping bentgrasses), two cold-season turfgrasses widely grown on golf courses in northern China. This disease first appears as small, water-soaked, and scattered leaf spots. Under conditions of high temperatures and successive days of rain, the infected leaves rapidly lose their integrity and large diseased patches appear. Fungal strains were isolated from blighted leaf spots. A phylogenetic analysis based on the nuc rDNA internal transcribed spacer regions and 5.8S rRNA gene (ITS1-5.8S-ITS2 = ITS) and parts of the ß-tubulin (TUB2) and RNA polymerase II second largest subunit (RPB2) genes strongly supported that these isolates are a distinct evolutionary lineage in Microdochium (Microdochiaceae, Xylariales) that represents a new taxonomic species, herein named as M. poae. Microscopic characters confirmed that these strains were morphologically distinct from known Microdochium species. The pathogenicity of M. poae was confirmed by inoculating spore suspension on both grasses and reisolation of the pathogen from symptomatic tissues. The optimal growth temperature suggests that the occurrence of the new leaf blight disease caused by M. poae was significantly different from the microdochium patch disease caused by M. nivale.


Assuntos
Agrostis/microbiologia , Doenças das Plantas/microbiologia , Poa/microbiologia , Xylariales/classificação , Xylariales/isolamento & purificação , China , Análise por Conglomerados , DNA Fúngico/química , DNA Fúngico/genética , DNA Ribossômico/química , DNA Ribossômico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , RNA Polimerases Dirigidas por DNA/genética , Kentucky , Microscopia , Filogenia , Folhas de Planta/microbiologia , RNA Ribossômico 5,8S/genética , Análise de Sequência de DNA , Tubulina (Proteína)/genética , Xylariales/citologia , Xylariales/genética
5.
Plant Dis ; 102(11): 2224-2232, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-30169134

RESUMO

Acidovorax avenae is the causal agent of bacterial etiolation and decline (BED) of creeping bentgrass, a poorly understood and often misdiagnosed disease that can result in considerable aesthetic and functional damage to golf course putting greens. Current diagnostics of BED are based on laborious culture-based methods. In this work, we employed a novel alignment-free primer prediction pipeline to design diagnostic primers for turfgrass-pathogenic A. avenae using 15 draft genomes of closely related target and nontarget Acidovorax spp. as input. Twenty candidate primer sets specific to turfgrass-pathogenic A. avenae were designed. The specificity and sensitivity of these primer sets were validated via a traditional polymerase chain reaction (PCR) and a real-time PCR assay. Primer sets 0017 and 0019 coupled with an internal oligo probe showed optimal sensitivity and specificity when evaluated with the target pathogen, closely related bacterial species, and microorganisms that inhabit the same host and soil environment. Finally, the accuracy of the newly developed real-time PCR assay was evaluated to detect BED pathogens from BED-symptomatic and asymptomatic turfgrass samples. The diagnostic results produced by the real-time PCR assay were consistent with results of a cultural-based method. This assay will allow quicker and more effective detection of the BED pathogen, thus potentially reducing misdiagnoses and unnecessary usage of fungicides.


Assuntos
Agrostis/microbiologia , Comamonadaceae/genética , Primers do DNA/genética , Genoma Bacteriano/genética , Doenças das Plantas/microbiologia , Reação em Cadeia da Polimerase em Tempo Real/métodos , Agrostis/fisiologia , Comamonadaceae/isolamento & purificação , Estiolamento , Patologia Molecular , Reação em Cadeia da Polimerase , Sensibilidade e Especificidade
6.
Plant Physiol Biochem ; 129: 244-250, 2018 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-29906774

RESUMO

Brown patch, caused by Rhizoctonia solani, is a serious disease in Agrostis stolonifera. 2, 3-butanediol (2, 3-BD) is the major component of volatile organic compounds and was found to initiate induced systemic resistance (ISR). To investigate the induced resistance mechanism of 2, 3-BD, we examined the effects of resistance by area affected, along with changes in the content of phytohormones (Zeatin (ZT), Abscisic Acid (ABA) and Indole-3-Acetic Acid (IAA)), the activities of three phenylpropanoid metabolic enzymes (Phenylalaninammo-Nialyase (PAL), Chalcone Isomerase (CHI) and 4-Coumarate:Coenzyme A Ligase (4CL)) and the level of secondary metabolites (total phenols, flavonoid and lignin). The result showed that 2, 3-BD treatment at 250 µmoL/L had the best induction effect with the area affected decreased from 95% of the control to 55%. Compared to the controls, treatment with 250 µmoL/L 2, 3-BD induced higher levels of PAL, CHI and 4CL activity and increased total phenols, flavonoid and lignin levels. While 2, 3-BD treatment decreased the content of ZT and ABA but increased the content of IAA compared to controls. This study provides a basis for elucidating the mechanism of 2, 3-BD as a new plant disease control agent.


Assuntos
Agrostis/efeitos dos fármacos , Antioxidantes/fisiologia , Butileno Glicóis/farmacologia , Resistência à Doença/efeitos dos fármacos , Doenças das Plantas/imunologia , Reguladores de Crescimento de Plantas/fisiologia , Rhizoctonia , Ácido Abscísico/metabolismo , Ácido Abscísico/fisiologia , Agrostis/metabolismo , Agrostis/microbiologia , Antioxidantes/metabolismo , Resistência à Doença/fisiologia , Flavonoides/metabolismo , Ácidos Indolacéticos/metabolismo , Lignina/metabolismo , Doenças das Plantas/microbiologia , Reguladores de Crescimento de Plantas/metabolismo , Sesquiterpenos/metabolismo , Zeatina/metabolismo , Zeatina/fisiologia , Fitoalexinas
7.
Phytopathology ; 108(1): 23-30, 2018 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-28846056

RESUMO

Bacterial etiolation and decline has developed into a widespread issue with creeping bentgrass (CBG) (Agrostis stolonifera) putting green turf. The condition is characterized by an abnormal elongation of turfgrass stems and leaves that in rare cases progresses into a rapid and widespread necrosis and decline. Recent reports have cited bacteria, Acidovorax avenae and Xanthomonas translucens, as causal agents; however, few cases exist where either bacterium were isolated in conjunction with turf exhibiting bacterial disease symptoms. From 2010 to 2014, turfgrass from 62 locations submitted to the NC State Turf Diagnostic Clinic exhibiting bacterial etiolation and/or decline symptoms were sampled for the presence of bacterial pathogens. Isolated bacteria were identified using rRNA sequencing of the 16S subunit and internal transcribed spacer region (16S-23S or ITS). Results showed diverse bacteria isolated from symptomatic turf and A. avenae and X. translucens were only isolated in 26% of samples. Frequently isolated bacterial species were examined for pathogenicity to 4-week-old 'G2' CBG seedlings and 8-week-old 'A-1' CBG turfgrass stands in the greenhouse. While results confirmed pathogenicity of A. avenae and X. translucens, Pantoea ananatis was also shown to infect CBG turf; although pathogenicity varied among isolated strains. These results illustrate that multiple bacteria are associated with bacterial disease and shed new light on culturable bacteria living in CBG turfgrass putting greens. Future research to evaluate additional microorganisms (i.e., bacteria and fungi) could provide new information on host-microbe interactions and possibly develop ideas for management tactics to reduce turfgrass pests.


Assuntos
Agrostis/microbiologia , Bactérias/isolamento & purificação , Doenças das Plantas/microbiologia , Agrostis/fisiologia , Bactérias/classificação , Bactérias/genética , Bactérias/patogenicidade , Estiolamento , Filogenia , Folhas de Planta/microbiologia , Folhas de Planta/fisiologia , Análise de Sequência de DNA , Virulência
8.
Phytopathology ; 107(6): 749-757, 2017 06.
Artigo em Inglês | MEDLINE | ID: mdl-28134592

RESUMO

Brachypodium distachyon is a C3 grass that is an attractive model host system for studying pathogenicity of major turfgrass pathogens due to its genetic similarity to many cool-season turfgrasses. Infection assays with two or more isolates of the casual agents of dollar spot, brown patch, and Microdochium patch resulted in compatible interactions with B. distachyon inbred line Bd21-3. The symptoms produced by these pathogens on Bd21-3 closely resembled those observed on the natural turfgrass host (creeping bentgrass), demonstrating that B. distachyon is susceptible to the fungal pathogens that cause dollar spot, brown patch, and Microdochium patch on turfgrasses. The interaction between Sclerotinia homoeocarpa isolates and Brachypodium ecotypes was also investigated. Interestingly, differential responses of these ecotypes to S. homoeocarpa isolates was found, particularly when comparing B. distachyon to B. hybridum ecotypes. Taken together, these findings demonstrate that B. distachyon can be used as a model host system for these turfgrass diseases and leveraged for studies of molecular mechanisms contributing to host resistance.


Assuntos
Agrostis/microbiologia , Ascomicetos/fisiologia , Brachypodium/microbiologia , Modelos Biológicos , Doenças das Plantas/microbiologia , Rhizoctonia/fisiologia , Ascomicetos/patogenicidade , Ecótipo , Interações Hospedeiro-Patógeno , Rhizoctonia/patogenicidade
9.
J Appl Microbiol ; 120(3): 756-69, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-26742658

RESUMO

AIMS: The aim of this study was to determine if endophytes from wild and ancient Zea plants (corn family) have anti-fungal activities, specifically against the most important fungal pathogen (Sclerotinia homoeocarpa) of creeping bentgrass, a relative of Zea, used here as a model grass. METHODS AND RESULTS: A library of 190 bacterial endophytes from wild, ancient and modern Zea plants were tested for their ability to suppress S. homoeocarpa in vitro, followed by in planta testing of candidates using greenhouse trials. Three endophytes could suppress S. homoeocarpa, originating from wild maize and an ancient Mexican landrace, consistent with our hypothesis. 16S phylogenetic analysis and BOX-PCR DNA fingerprinting suggest that the anti-fungal endophytes are distinct strains of Burkholderia gladioli. One strain (3A12) was confirmed to colonize creeping bentgrass using green fluorescent protein (GFP) tagging. Evans blue vitality staining demonstrated that the bacterial endophytes exhibited fungicidal activities against the pathogen. The endophytes inhibited a wide spectrum of plant-associated fungi including diverse crop pathogens. CONCLUSIONS: The results support the hypothesis that wild and ancient Zea genotypes host bacterial endophytes that can control fungal pathogen(s). SIGNIFICANCE AND IMPACT OF THE STUDY: These results suggest that wild and ancient crops may be an unexplored reservoir of anti-fungal bacterial endophytes.


Assuntos
Antibiose , Ascomicetos/fisiologia , Fenômenos Fisiológicos Bacterianos , Endófitos/fisiologia , Doenças das Plantas/microbiologia , Zea mays/microbiologia , Agrostis/microbiologia , Bactérias/classificação , Bactérias/genética , Bactérias/isolamento & purificação , Produtos Agrícolas/microbiologia , Endófitos/genética , Endófitos/isolamento & purificação , Genótipo , Dados de Sequência Molecular , Filogenia , Doenças das Plantas/prevenção & controle
10.
PLoS One ; 9(10): e110897, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25333928

RESUMO

Dollar spot is the most economically important disease of amenity turfgrasses in the United States, yet little is known about the source of primary inoculum for this disease. With the exception of a few isolates from the United Kingdom, Sclerotinia homoeocarpa, the causal agent of dollar spot, does not produce spores. Consequently, it was assumed that overwintering of this organism in soil, thatch, and plant debris provides primary inoculum for dollar spot epidemics. Overwintering of S. homoeocarpa in roots and shoots of symptomatic and asymptomatic creeping bentgrass turfgrass was quantified over the course of a three-year field experiment. Roots did not consistently harbor S. homoeocarpa, whereas S. homoeocarpa was isolated from 30% of symptomatic shoots and 10% of asymptomatic shoots in the spring of two out of three years. The presence of stroma-like pathogen material on leaf blades was associated with an increase in S. homoeocarpa isolation and colony diameter at 48 hpi. Commercial seed has also been hypothesized to be a potential source of initial inoculum for S. homoeocarpa. Two or more commercial seed lots of six creeping bentgrass cultivars were tested for contamination with S. homoeocarpa using culture-based and molecular detection methods. A viable, pathogenic isolate of S. homoeocarpa was isolated from one commercial seed lot and contamination of this lot was confirmed with nested PCR using S. homoeocarpa specific primers. A sensitive nested PCR assay detected S. homoeocarpa contamination in eight of twelve (75%) commercial seed lots. Seed source, but not cultivar or resistance to dollar spot, influenced contamination by S. homoeocarpa. Overall, this research suggests that seeds are a potential source of initial inoculum for dollar spot epidemics and presents the need for further research in this area.


Assuntos
Agrostis/microbiologia , Ascomicetos/isolamento & purificação , Doenças das Plantas/microbiologia , Sementes/microbiologia , Agrostis/crescimento & desenvolvimento , Ascomicetos/patogenicidade , Folhas de Planta/microbiologia , Sementes/crescimento & desenvolvimento , Estados Unidos
11.
Int J Phytoremediation ; 16(7-12): 643-59, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24933875

RESUMO

We examined whether long-term Cd exposure leads to beneficial changes in the cultivable endophytic bacteria present in the seeds of Agrostis capillaris. Therefore the cultivable seed endophytes of Agrostis capillaris growing on a long-term Cd/Ni-contaminated plot (Cd/Ni seeds) were compared with those originating from a non-contaminated plot (control seeds). We observed plant- and contaminant-dependent effects on the population composition between control and Cd/Ni seeds. Also differences in phenotypic characteristics were found: endophytes from Cd/Ni seeds exhibited more ACC deaminase activity and production of siderophores and IAA, while endophytes from control seeds, very surprisingly, showed more metal tolerance. Finally, the 3 most promising seed endophytes were selected based on their metal tolerance and plant growth promoting potential, and inoculated in Agrostis capillaris seedlings. In case of non-exposed plants, inoculation resulted in a significantly improved plant growth; after inoculation of Cd-exposed plants an increased Cd uptake was achieved without affecting plant growth. This indicates that inoculation of Agrostis with its seed endophytes might be beneficial for its establishment during phytoextraction and phytostabilisation of Cd-contaminated soils.


Assuntos
Agrostis/microbiologia , Bactérias/metabolismo , Cádmio/metabolismo , Endófitos/metabolismo , Níquel/metabolismo , Poluentes do Solo/metabolismo , Agrostis/crescimento & desenvolvimento , Agrostis/metabolismo , Bacillus/isolamento & purificação , Bacillus/metabolismo , Bactérias/efeitos dos fármacos , Bactérias/isolamento & purificação , Biodegradação Ambiental , Cádmio/análise , Cádmio/farmacologia , Endófitos/efeitos dos fármacos , Endófitos/isolamento & purificação , Genótipo , Hidroponia , Níquel/análise , Níquel/farmacologia , Pantoea/isolamento & purificação , Pantoea/metabolismo , Fenótipo , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/metabolismo , Raízes de Plantas/microbiologia , Brotos de Planta/crescimento & desenvolvimento , Brotos de Planta/metabolismo , Brotos de Planta/microbiologia , Sementes/crescimento & desenvolvimento , Sementes/metabolismo , Sementes/microbiologia , Solo/química , Poluentes do Solo/análise , Poluentes do Solo/farmacologia , Fatores de Tempo
12.
ScientificWorldJournal ; 2014: 601314, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24778589

RESUMO

To enhance the natural plant resistance and to evaluate the antimicrobial properties of phylloplanin against blue mold, we have expressed a synthetic chimeric native-phylloplanin-GFP protein fusion in transgenic Nicotiana tabacum cv. KY14, a cultivar that is highly susceptible to infection by Peronospora tabacina. The coding sequence of the tobacco phylloplanin gene along with its native signal peptide was fused with GFP at the carboxy terminus. The synthetic chimeric gene (native-phylloplanin-GFP) was placed between the modified Mirabilis mosaic virus full-length transcript promoter with duplicated enhancer domains and the terminator sequence from the rbcSE9 gene. The chimeric gene, expressed in transgenic tobacco, was stably inherited in successive plant generations as shown by molecular characterization, GFP quantification, and confocal fluorescent microscopy. Transgenic plants were morphologically similar to wild-type plants and showed no deleterious effects due to transgene expression. Blue mold-sensitivity assays of tobacco lines were performed by applying P. tabacina sporangia to the upper leaf surface. Transgenic lines expressing the fused synthetic native-phyllopanin-GFP gene in the leaf apoplast showed resistance to infection. Our results demonstrate that in vivo expression of a synthetic fused native-phylloplanin-GFP gene in plants can potentially achieve natural protection against microbial plant pathogens, including P. tabacina in tobacco.


Assuntos
Proteínas de Fluorescência Verde/genética , Nicotiana/genética , Doenças das Plantas/genética , Proteínas de Plantas/genética , Agrostis/genética , Agrostis/metabolismo , Agrostis/microbiologia , Western Blotting , Parede Celular/genética , Parede Celular/metabolismo , Parede Celular/microbiologia , Resistência à Doença/genética , Regulação da Expressão Gênica de Plantas , Proteínas de Fluorescência Verde/metabolismo , Interações Hospedeiro-Patógeno , Microscopia Confocal , Peronospora/fisiologia , Doenças das Plantas/microbiologia , Folhas de Planta/genética , Folhas de Planta/metabolismo , Folhas de Planta/microbiologia , Proteínas de Plantas/metabolismo , Plantas Geneticamente Modificadas , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Esporos Fúngicos/fisiologia , Nicotiana/metabolismo , Nicotiana/microbiologia
13.
Environ Sci Pollut Res Int ; 21(11): 6859-76, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-23821250

RESUMO

Applied research programs in the remediation of contaminated areas can be used also for gaining insights in the physiological and ecological mechanisms supporting the resistance of plant communities in stress conditions due to toxic elements. The research hypothesis of this study was that in the heavily contaminated but nutrient-poor substrate of mine tailing dams, the beneficial effect of inoculation with arbuscular mychorrizal fungi (AMF) is due to an improvement of phosphorus nutrition rather than to a reduction of toxic element transfer to plants. A concept model assuming a causal chain from root colonization to element uptake, oxidative stress variables, and overall plant development was used. The methodological novelty lies in coupling in a single research program experiments conducted at three scales: pot, lysimeter, and field plot, with different ages of plants at the sampling moment (six subsets of samples in all). The inoculation with AMF in expanded clay carrier had a beneficial effect on the development of plants in the amended tailing substrate heavily contaminated with toxic elements. The effect of inoculation was stronger when the quantity of expanded carrier was smaller (1 % vs. 7 % inoculum), probably because of changes in substrate features. The improvement of plant growth was due mainly to an improvement in phosphorus nutrition leading to an increase of protein concentration and decrease of oxidative stress enzyme activity (superoxide dismutase and peroxidase). In a single data subset, an effect of inoculation on the uptake of several toxic elements could be proved (decrease of As concentration in plant roots correlated with a decrease of oxidative stress independent from the effect of P concentration increase). The multi-scale approach allowed us to find differences between the patterns characterising the data subsets. These subset-specific patterns point out the existence of physiological differences between plants in different development states (as a result of sampling at different plant ages). From an applied perspective, conclusions are drawn with respect to the use of plants in the monitoring programs of contaminated areas and the use of inoculation with AMF in the remediation of tailing dams.


Assuntos
Agrostis/crescimento & desenvolvimento , Agrostis/metabolismo , Recuperação e Remediação Ambiental/métodos , Glomeromycota/fisiologia , Micorrizas/fisiologia , Estresse Oxidativo/fisiologia , Agrostis/microbiologia , Metais Pesados/análise , Mineração , Peroxidase/metabolismo , Fósforo/metabolismo , Romênia , Solo/química , Superóxido Dismutase/metabolismo , Fatores de Tempo , Resíduos/análise
14.
PLoS One ; 7(8): e41150, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22905098

RESUMO

Sclerotinia homoeocarpa causes dollar spot disease, the predominate disease on highly-maintained turfgrass. Currently, there are major gaps in our understanding of the molecular interactions between S. homoeocarpa and creeping bentgrass. In this study, 454 sequencing technology was used in the de novo assembly of S. homoeocarpa and creeping bentgrass transcriptomes. Transcript sequence data obtained using Illumina's first generation sequencing-by-synthesis (SBS) were mapped to the transcriptome assemblies to estimate transcript representation in different SBS libraries. SBS libraries included a S. homoeocarpa culture control, a creeping bentgrass uninoculated control, and a library for creeping bentgrass inoculated with S. homoeocarpa and incubated for 96 h. A Fisher's exact test was performed to determine transcripts that were significantly different during creeping bentgrass infection with S. homoeocarpa. Fungal transcripts of interest included glycosyl hydrolases, proteases, and ABC transporters. Of particular interest were the large number of glycosyl hydrolase transcripts that target a wide range of plant cell wall compounds, corroborating the suggested wide host range and saprophytic abilities of S. homoeocarpa. Several of the multidrug resistance ABC transporters may be important for resistance to both fungicides and plant defense compounds. Creeping bentgrass transcripts of interest included germins, ubiquitin transcripts involved in proteasome degradation, and cinnamoyl reductase, which is involved in lignin production. This analysis provides an extensive overview of the S. homoeocarpa-turfgrass pathosystem and provides a starting point for the characterization of potential virulence factors and host defense responses. In particular, determination of important host defense responses may assist in the development of highly resistant creeping bentgrass varieties.


Assuntos
Agrostis/metabolismo , Agrostis/microbiologia , Ascomicetos/metabolismo , RNA/metabolismo , Análise de Sequência de RNA/métodos , Antifúngicos/farmacologia , Mapeamento Cromossômico/métodos , Biologia Computacional/métodos , Resistência a Múltiplos Medicamentos , Regulação Fúngica da Expressão Gênica , Regulação da Expressão Gênica de Plantas , Biblioteca Gênica , Lignina/química , Modelos Genéticos , N-Glicosil Hidrolases/metabolismo , Estrutura Terciária de Proteína , Análise de Sequência de DNA , Software , Fatores de Tempo
15.
PLoS One ; 6(9): e24677, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21931807

RESUMO

BACKGROUND: Turfgrass species are agriculturally and economically important perennial crops. Turfgrass species are highly susceptible to a wide range of fungal pathogens. Dollar spot and brown patch, two important diseases caused by fungal pathogens Sclerotinia homoecarpa and Rhizoctonia solani, respectively, are among the most severe turfgrass diseases. Currently, turf fungal disease control mainly relies on fungicide treatments, which raises many concerns for human health and the environment. Antimicrobial peptides found in various organisms play an important role in innate immune response. METHODOLOGY/PRINCIPAL FINDINGS: The antimicrobial peptide - Penaeidin4-1 (Pen4-1) from the shrimp, Litopenaeus setiferus has been reported to possess in vitro antifungal and antibacterial activities against various economically important fungal and bacterial pathogens. In this study, we have studied the feasibility of using this novel peptide for engineering enhanced disease resistance into creeping bentgrass plants (Agrostis stolonifera L., cv. Penn A-4). Two DNA constructs were prepared containing either the coding sequence of a single peptide, Pen4-1 or the DNA sequence coding for the transit signal peptide of the secreted tobacco AP24 protein translationally fused to the Pen4-1 coding sequence. A maize ubiquitin promoter was used in both constructs to drive gene expression. Transgenic turfgrass plants containing different DNA constructs were generated by Agrobacterium-mediated transformation and analyzed for transgene insertion and expression. In replicated in vitro and in vivo experiments under controlled environments, transgenic plants exhibited significantly enhanced resistance to dollar spot and brown patch, the two major fungal diseases in turfgrass. The targeting of Pen4-1 to endoplasmic reticulum by the transit peptide of AP24 protein did not significantly impact disease resistance in transgenic plants. CONCLUSION/SIGNIFICANCE: Our results demonstrate the effectiveness of Pen4-1 in a perennial species against fungal pathogens and suggest a potential strategy for engineering broad-spectrum fungal disease resistance in crop species.


Assuntos
Agrostis/metabolismo , Agrostis/microbiologia , Peptídeos Catiônicos Antimicrobianos/metabolismo , Resistência à Doença/fisiologia , Plantas Geneticamente Modificadas/metabolismo , Plantas Geneticamente Modificadas/microbiologia , Agrostis/genética , Peptídeos Catiônicos Antimicrobianos/genética , Ascomicetos/imunologia , Ascomicetos/patogenicidade , Resistência à Doença/genética , Micoses/imunologia , Plantas Geneticamente Modificadas/genética , Rhizoctonia/imunologia , Rhizoctonia/patogenicidade
16.
Methods Mol Biol ; 722: 167-78, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21590420

RESUMO

Deep transcriptome profiling of pathogen-infected tissues enhances the understanding of molecular mechanisms underlying host-pathogen interactions. Illumina's next generation sequencing technology sequencing-by-synthesis (SBS) is a powerful tool to rapidly sequence genomes and transcriptomes at an affordable rate. We modified the procedure for SBS library construction to significantly increase the efficiency of library construction. Using our improved method, two Sclerotinia homoeocarpa libraries were constructed from mycelia grown in potato dextrose broth (PDB) or potato dextrose agar (PDA) for 96 h, respectively, and two creeping bentgrass libraries were constructed from leaves 96 h after inoculation with S. homoeocarpa or water sprayed, respectively. About 4-7 million mRNA signatures were sequenced from each library. Sequence analysis using BLAST was performed against sequenced fungal genomes and rice genomic sequence to identify the expressed genes in both S. homoeocarpa mycelia and creeping bentgrass. Bioinformatic analysis identified many expressed genes in the pathogen and host. A public database to access the sequence data was developed at http://www.dstidb.org . Our results demonstrate how SBS technology can unravel transcriptome complexity during the creeping bentgrass-S. homoeocarpa interaction.


Assuntos
Agrostis/microbiologia , Ascomicetos/fisiologia , Perfilação da Expressão Gênica , Interações Hospedeiro-Patógeno/genética , Análise de Sequência de DNA/métodos , Ascomicetos/genética , Ascomicetos/crescimento & desenvolvimento , Ascomicetos/metabolismo , Biologia Computacional/métodos , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Biblioteca Gênica , Genoma Fúngico , Genoma de Planta , Interações Hospedeiro-Patógeno/fisiologia , Micélio/genética , Micélio/metabolismo , Doenças das Plantas/microbiologia , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo
17.
FEMS Microbiol Lett ; 317(1): 43-51, 2011 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21219415

RESUMO

Soil-microorganism symbioses are of fundamental importance for plant adaptation to the environment. Research in microbial ecology has revealed that some soil bacteria are associated with arbuscular mycorrhizal fungi (AMF). However, these interactions may be much more complex than originally thought. To assess the type of bacteria associated with AMF, we initially isolated spores of Glomus irregulare from an Agrostis stolonifera rhizosphere. The spores were washed with sterile water and plated onto G. irregulare mycelium growing in vitro in a root-free compartment of bicompartmented Petri dishes. We hypothesized that this system should select for bacteria closely associated with the fungus because the only nutrients available to the bacteria were those derived from the hyphae. Twenty-nine bacterial colonies growing on the AMF hyphae were subcultured and identified using 16S rRNA gene sequences. All bacterial isolates showed high sequence identity to Bacillus cereus, Bacillus megaterium, Bacillus simplex, Kocuria rhizophila, Microbacterium ginsengisoli, Sphingomonas sp. and Variovorax paradoxus. We also assessed bacterial diversity on the surface of spores by PCR-denaturating gradient gel electrophoresis. Finally, we used live cellular imaging to show that the bacteria isolated can grow on the surface of hyphae with different growing patterns in contrast to Escherichia coli as a control.


Assuntos
Bactérias/classificação , Bactérias/isolamento & purificação , Biodiversidade , Glomeromycota/crescimento & desenvolvimento , Interações Microbianas , Micorrizas/crescimento & desenvolvimento , Microbiologia do Solo , Agrostis/microbiologia , Bactérias/genética , Análise por Conglomerados , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Dados de Sequência Molecular , Filogenia , RNA Ribossômico 16S/genética , Rizosfera , Análise de Sequência de DNA
18.
Mycorrhiza ; 20(6): 365-73, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-20049617

RESUMO

The hypothesis that mycorrhizal colonization improves the soil-root conductance in plants was experimentally tested in a growth chamber using pot cultures of Agrostis stolonifera L. colonized by Glomus intraradices. Plants were grown in 50-l pots filled with autoclaved sand/silt soil (1:1), with and without the mycorrhizal fungus. Within the mycorrhizal treatment, half of the pots remained well watered, while the other half was subjected to a progressive water deficit. Soil water potential (estimated as plant water potential measured at the end of the dark period), xylem water potential measured at the tiller base, transpiration rate, and soil water content were monitored throughout the experiment. Soil-root hydraulic conductance was estimated as the ratio between the instantaneous transpiration rate and the soil and xylem water potential difference. To obtain cultures with similar nutritional status, the P in the modified Hoagland's nutrient solution was withheld from the inoculated pots and applied only once a month. Even though there were no differences on growth or nutrient status for the mycorrhizal treatments, water transport was enhanced by the inoculum presence. Transpiration rate was maintained at lower xylem water potential values in the presence of mycorrhizae. The analysis of the relationship between soil-root hydraulic resistance and soil water content showed that mycorrhizal colonization increased soil-root hydraulic conductance as the soil dried. For these growing conditions, this effect was ascribed to the range of 6-10%.


Assuntos
Agrostis/microbiologia , Glomeromycota/fisiologia , Micorrizas/fisiologia , Solo , Água/metabolismo , Agrostis/crescimento & desenvolvimento , Agrostis/metabolismo , Biomassa , Raízes de Plantas/metabolismo , Raízes de Plantas/microbiologia , Xilema/metabolismo
19.
Theor Appl Genet ; 113(8): 1421-35, 2006 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-16969681

RESUMO

Dollar spot caused by Sclerotinia homoeocarpa F. T. Bennett is the most economically important turf disease on golf courses in North America. Dollar spot resistance in a creeping bentgrass cultivar would greatly reduce the frequency, costs, and environmental impacts of fungicide application. Little work has been done to understand the genetics of resistance to dollar spot in creeping bentgrass. Therefore, QTL analysis was used to determine the location, number and effects of genomic regions associated with dollar spot resistance in the field. To meet this objective, field inoculations using a single isolate were performed over 2 years and multiple locations using progeny of a full sib mapping population '549 x 372'. Dollar spot resistance seems to be inherited quantitatively and broad sense heritability for resistance was estimated to be 0.88. We have detected one QTL with large effect on linkage group 7.1 with LOD values ranging from 3.4 to 8.6 and explaining 14-36% of the phenotypic variance. Several smaller effect QTL specific to rating dates, locations and years were also detected. The association of the tightly linked markers with the LG 7.1 QTL based on 106 progeny was further examined by single marker analysis on all 697 progeny. The high significance of the QTL on LG 7.1 at a sample size of 697 (P < 0.0001), along with its consistency across locations, years and ratings dates, indicated that it was stable over environments. Markers tightly linked to the QTL can be utilized for marker-assisted selection in future bentgrass breeding programs.


Assuntos
Agrostis/genética , Agrostis/microbiologia , Ascomicetos , Doenças das Plantas/genética , Doenças das Plantas/microbiologia , Locos de Características Quantitativas , Mapeamento Cromossômico , Ligação Genética , Fenótipo
20.
Can J Microbiol ; 52(5): 404-10, 2006 May.
Artigo em Inglês | MEDLINE | ID: mdl-16699564

RESUMO

Irrigation and an in vitro agitation assay were used to determine the percentage of the epiphytic yeast community (Cryptococcus, Pseudozyma, Rhodotorula, and Sporobolomyces) adhering to the phylloplane of creeping bentgrass (Agrostis palustris (Huds.) Pers.). Colony-forming units (cfu) of total epiphytic yeast populations (adherent and nonadherent cells) and of adherent populations (cells not removed by agitation) were determined by leaf washing and dilution plating. In an in vitro assay, 40.0% and 57.1% of the yeast adhered to the leaves, whereas, in initial field trials the percentage of adherent yeasts ranged from 40.0% to 71.9% of the total population. Adherent yeast cfu on leaves in the morning were significantly lower on bentgrass (8.0 x 103 to 3.1 x 104 cfu.cm(-2)) compared with total yeast cfu (1.4 x 104 to 4.7 x 104 cfu.cm(-2)) on the nonirrigated control. No differences in yeast populations were observed between irrigated and nonirrigated plots 2 h after the 0900 treatments. Yeast populations followed a diurnal pattern, with larger cfu recovered from bentgrass leaves in the morning and significantly lower populations recovered in the afternoon. At 1400 the adherent yeast were 83.1%-100% of the total yeast population recovered from the leaves. The relative adhesiveness of the epiphytic yeast community on bentgrass leaves is dynamic with nonadherent cells making up a larger percentage of the population in the mornings than the afternoons.


Assuntos
Agrostis/microbiologia , Leveduras/fisiologia , Contagem de Colônia Microbiana , Ecossistema , Monitoramento Ambiental , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Especificidade da Espécie , Fatores de Tempo , Leveduras/isolamento & purificação
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